CDS

Accession Number TCMCG006C88261
gbkey CDS
Protein Id XP_013683306.1
Location join(15472082..15472725,15473223..15473371,15473466..15473695,15473797..15473905,15473999..15474129,15474405..15474506,15474605..15474886,15474972..15475075,15475151..15475445,15475519..15475752,15475849..15476085,15476215..15476529)
Gene LOC106387912
GeneID 106387912
Organism Brassica napus

Protein

Length 943aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013827852.2
Definition chaperone protein ClpD, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category O
Description Belongs to the ClpA ClpB family
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03110        [VIEW IN KEGG]
KEGG_ko ko:K03696        [VIEW IN KEGG]
EC -
KEGG_Pathway ko01100        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034214        [VIEW IN EMBL-EBI]
GO:0034605        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0047484        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:1901000        [VIEW IN EMBL-EBI]
GO:1901002        [VIEW IN EMBL-EBI]
GO:1902584        [VIEW IN EMBL-EBI]
GO:2000070        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAAGTCTTATCTACTTCCTCTCCTCTAACCCTTCACACCCGCCGTCTCCCCTCTTCTTCATCTTCTCCCGTCACCTCCTTCGCCGCTTCTTCCCTCTCTTCCTTCTCCTCCTCCTACCTCGGAATCTCCCTCTCCAACCGCCGTACGATCCACCGCCTCTCCACAACTCCAACGAACTCCCGCCGATTCCCCCGCAAGAAACGAAACAAACTCACCCCGATCTCAGCCGTTTTCGAGCGGTTCACGGAACGAGCCATCAGAGCCATCATCTTCTCCCAGAAGGAAGCTAAATCGTTGGGGAAAGACATGGTCTACCCTCAGCACCTTCTCCTCGGCCTCATCGCCGAGGATCGCGACCCTCAGGGGTTCCTCGGATCCGGAGTCACCGTAGACAAGGCGCGTGAAGCTGTCTCGAGTATCTGGGACAAAGCTAACTCCGACGATTCGGGCTTATCGGAGTCGTCGTCGTCGAGTTCGTACTCTAGGTCCACGGATATGCCGTTCTCGATCAGCACGAAGCGGGTGTTCGAAGCTGCGGTGGAGTATTCGAGGACTTTGGAGTGTCAGTATATTGCTCCCGAGCATATAGCTGTCGGACTCTTTACCGTTGATGACGGTAGCGCTGGGAAAGTCCTCAAGAGATTGGGAGCAAATATGAATTTGCTCACAGCAGCAGCACTGACCAGACTTAAAGGAGAGATTGCCAAAGACGGAAGAGAACCACCTTCTTCTAAAGACGCTTCCCCTAATGGCAGAGTTGGTGGTCCTGGAAGTGCTGGAAGAACTAAAGAGAAAAGTGTACTGGAACAGTTCTGTGTGGATCTTACGGCACGAGCTAGCGAGGGGCTTATTGATCCTGTTATTGGCAGGGAGAAGGAAGTTCAAAGAGTCATCCAGATACTTTGCCGCAGAACCAAAAACAACCCTATTCTTCTAGGTGAGGCTGGTGTTGGGAAGACCGCCATCGCTGAAGGACTAGCGATTAGTATTGCGGAAGCAAATGCTCCTGGATTTCTCTTGACAAAACGCATCATGTCCCTGGATATAGGACTGCTTATGGCTGGTGCAAAGGAAAGAGGGGAACTGGAATCACGAGTCACTGCTTTGATAAGCGAAGTGAAAAAATCAGGTAAGGTGATTCTCTTCATAGATGAAGTGCACACTCTTATTGGATCTGGCACAGTCGGAAGAGGCAACAAAGGGTCTGGTCTTGACATTGCTAATCTCTTGAAACCACCACTTGGAAGGGGTGAACTTCAGTGCATTGCATCCACAACCCTTGACGAATTCAGGAGTCAGTTTGAGAAGGACAAAGCCCTAGCAAGGAGGTTCCAGCCAGTGTTGATTGACGAGCCAAGCGAGGAAGACGCGGTGAAGATTTTGATAGGCCTTCGTGAAAAATACGAAGCCCATCACAACTGCAAATACACTATGGAAGCTATAGATGCTGCAGTGTACCTTTCATCGCGATACATCGCGGATAGGTTTCTTCCAGATAAAGCTATCGATCTTATTGACGAGGCGGGAAGCAGAGCTCGCATCCAAGCTTTTAGAAAGAAAAAGGAGGATGCAATCTGTATCCTTTCGAAGCCACCGGATGATTACTGGCAAGAGATCAGAACTGTTCAGGCCATGCACGAAGTGGTTCTATCAAGCAGGCCGAACCAGGAAGATGGTAATAACATTGTAGACGAGTCTACTGAACTAGTTGAGGAGTCTTCTCTACCACCTGCAGCAGGCAACGATGAGCCTATAGAGGTGGGGCCTGATGATATTGCAGCGGTTGCATCGGCTTGGTCTGGAATTCCAGTTCAGCAGATCACCGCAGATGAGAGAATGCTTCTTATGGGTCTAGAAGATGAGCTCAGAAACAGAGTCGTTGGTCAAGACGAGGCCGTAGCTGCCATATCTAGAGCTGTGAAGAGGTCACGTGTTGGCTTAAAAGATCCTGACCGTCCTATTGCCGCTATGCTGTTCTGTGGACCTACTGGAGTTGGAAAAACCGAACTCACTAAAGCTCTAGCAGCTAATTATTTTGGATCGGAGGAATCTATGCTGAGATTGGACATGAGTGAGTACATGGAGCGTCATACGGTGAGCAAATTGATAGGCTCTCCTCCCGGATATGTTGGTTTTGAAGAAGGTGGAATGCTCACTGAAGCTATCAGGAGACGTCCTTTTACAGTGGTTTTATTCGATGAGATAGAGAAAGCCCATCCTGATATTTTCAACATTCTTCTCCAGCTCTTCGAAGACGGCCATCTTACCGATTCACAGGGAAGGAGAGTGTCTTTCAAGAACGCACTGATCATAATGACCTCTAATGTCGGATCATCAGCCATTGCCAAGGGAAGACAGAGGTCAATCGGTTTTATCCTCGATGATGACGAAGAGGAAGCTTCTTACTCTGGTATGAAAGCTTTGGTAGTCGAAGAACTCAAGAACTACTTCCGTCCAGAGTTGTTGAACCGTATTGACGAAATCGTCATCTTCAGACAGCTCGAGCAGGCGCAGATGATGGAGATTTTGAATCTGATGTTACAAGACTTGAAGTCGAGGCTTGTGGCACTTGGAGTCGGTTTAGAGGTGTCTGAACCTGTCAAGGAGCTTATATGCAGACAAGGCTATGATCCGGCCTACGGTGCACGACCACTACGTAGAACCGTCACGGAGATTGTGGAAGATCCACTCAGCGAAGCCTTTCTTGCTGGGAGCTTTAAGCCCGGTGACACGGCTTTTGTGGTTCTCGATGATACAGGAAACCCTTCGGTTCGGACCAAACCAGATTCTCACAATGTACGAGTTACAGACAAGACATCGATCGCATAG
Protein:  
MEVLSTSSPLTLHTRRLPSSSSSPVTSFAASSLSSFSSSYLGISLSNRRTIHRLSTTPTNSRRFPRKKRNKLTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYPQHLLLGLIAEDRDPQGFLGSGVTVDKAREAVSSIWDKANSDDSGLSESSSSSSYSRSTDMPFSISTKRVFEAAVEYSRTLECQYIAPEHIAVGLFTVDDGSAGKVLKRLGANMNLLTAAALTRLKGEIAKDGREPPSSKDASPNGRVGGPGSAGRTKEKSVLEQFCVDLTARASEGLIDPVIGREKEVQRVIQILCRRTKNNPILLGEAGVGKTAIAEGLAISIAEANAPGFLLTKRIMSLDIGLLMAGAKERGELESRVTALISEVKKSGKVILFIDEVHTLIGSGTVGRGNKGSGLDIANLLKPPLGRGELQCIASTTLDEFRSQFEKDKALARRFQPVLIDEPSEEDAVKILIGLREKYEAHHNCKYTMEAIDAAVYLSSRYIADRFLPDKAIDLIDEAGSRARIQAFRKKKEDAICILSKPPDDYWQEIRTVQAMHEVVLSSRPNQEDGNNIVDESTELVEESSLPPAAGNDEPIEVGPDDIAAVASAWSGIPVQQITADERMLLMGLEDELRNRVVGQDEAVAAISRAVKRSRVGLKDPDRPIAAMLFCGPTGVGKTELTKALAANYFGSEESMLRLDMSEYMERHTVSKLIGSPPGYVGFEEGGMLTEAIRRRPFTVVLFDEIEKAHPDIFNILLQLFEDGHLTDSQGRRVSFKNALIIMTSNVGSSAIAKGRQRSIGFILDDDEEEASYSGMKALVVEELKNYFRPELLNRIDEIVIFRQLEQAQMMEILNLMLQDLKSRLVALGVGLEVSEPVKELICRQGYDPAYGARPLRRTVTEIVEDPLSEAFLAGSFKPGDTAFVVLDDTGNPSVRTKPDSHNVRVTDKTSIA